PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_028038

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

VOZ

Protein Properties

Length: 495aa MW: 54608.3 Da PI: 5.5176

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_028038	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	408.6	1.2e-125	214	434	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgs.ewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfd 97 pppsaflgpkcalwdc+rpaqg e++qdycs+fh +la eg+pg+tpvlrp+gi+lkd++lf+al+ak++gk+vg+p+cegaata+spwn +elfd DCAR_028038 214 PPPSAFLGPKCALWDCPRPAQGWnEDYQDYCSTFHGALAPIEGSPGMTPVLRPGGIGLKDSVLFSALKAKAEGKDVGVPVCEGAATARSPWNVPELFD 311 89******************6378******************************************************************** PP VOZ 98 lsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 l++lege irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp++++ewhl+eyei+++da+alyrlelklvd+kks DCAR_028038 312 LTVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYKGRGWHESRKQVMNEFGGLKRSYYMDPQPMENLEWHLFEYEISKCDACALYRLELKLVDGKKS 409 ************************************************************************************************ PP VOZ 196 akgk...vskdsladlqkklgrlta 217 +kgk v +dsladlqk++grlta DCAR_028038 410 PKGKegkVGNDSLADLQKQMGRLTA 434 9765559**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence Send to blast
MPKATKKNGV AGHQVFKDRA KNRVDDLQGM FSDLQSARKE SRSNDVMLLE NQVHQMLKEW 60 KSELNQPSPA SSFQGSDSLG LVSSEIERLV LQLREEEDDA TSGLGATKHD PDGPTGQQFG 120 SNIVHQQVFD VSNVPHQQGF ELIDHFKGSP SGANNVGTNS MGVNNMAVPT QLDYYAFDMH 180 QEIGQTFITG FNNTAFCNED VLPQISAFLP SICPPPSAFL GPKCALWDCP RPAQGWNEDY 240 QDYCSTFHGA LAPIEGSPGM TPVLRPGGIG LKDSVLFSAL KAKAEGKDVG VPVCEGAATA 300 RSPWNVPELF DLTVLEGEII REWLFFDKPR RAFESGNRKQ RSLPDYKGRG WHESRKQVMN 360 EFGGLKRSYY MDPQPMENLE WHLFEYEISK CDACALYRLE LKLVDGKKSP KGKEGKVGND 420 SLADLQKQMG RLTAAPRDKR SVKGRAKSNL KDAAPNANSA PNQTTPTIDE FDYGTVAPCD 480 YLVENLTGYG DYLT*

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence Send to blast

MPKATKKNGV AGHQVFKDRA KNRVDDLQGM FSDLQSARKE SRSNDVMLLE NQVHQMLKEW  60
KSELNQPSPA SSFQGSDSLG LVSSEIERLV LQLREEEDDA TSGLGATKHD PDGPTGQQFG  120
SNIVHQQVFD VSNVPHQQGF ELIDHFKGSP SGANNVGTNS MGVNNMAVPT QLDYYAFDMH  180
QEIGQTFITG FNNTAFCNED VLPQISAFLP SICPPPSAFL GPKCALWDCP RPAQGWNEDY  240
QDYCSTFHGA LAPIEGSPGM TPVLRPGGIG LKDSVLFSAL KAKAEGKDVG VPVCEGAATA  300
RSPWNVPELF DLTVLEGEII REWLFFDKPR RAFESGNRKQ RSLPDYKGRG WHESRKQVMN  360
EFGGLKRSYY MDPQPMENLE WHLFEYEISK CDACALYRLE LKLVDGKKSP KGKEGKVGND  420
SLADLQKQMG RLTAAPRDKR SVKGRAKSNL KDAAPNANSA PNQTTPTIDE FDYGTVAPCD  480
YLVENLTGYG DYLT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	FJ149722	4e-74	FJ149722.1 Daucus carota subsp. sativus clone BAC C080K06 genomic sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017223272.1	0.0	PREDICTED: transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A175YMS0	0.0	A0A175YMS0_DAUCS; Uncharacterized protein
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	DCAR_028038

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]