PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026711
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 382aa    MW: 43252.4 Da    PI: 4.9265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026711genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.15.3e-30271601128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                  lppG+rF P+deel+ ++Lk  +++ +    + i +v++y + P +L  ++  + e+ wyfF+kr +kya+g+r+ ra+  gyWk+t    ++     
  DCAR_026711  27 LPPGYRFVPEDEELIEKFLKVIIKNPERGRVQGIFTVNLYASSPDELTaAHKPQCEDTWYFFTKRTRKYANGSRPARAAGYGYWKQTNVVDSINYGvd 124
                  79**********************999777788**************93333345669*******************************999998765 PP

          NAM  96 .kgel....vglkktLvfykgrapkgektdWvmheyrl 128
                   +  +    +g k tL +  +++   ++tdW m+eyrl
  DCAR_026711 125 eQ--KepvkIGRKITLDYCYKNNGVESRTDWKMNEYRL 160
                  41..14555*********877777779*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-3624189IPR003441NAC domain
PROSITE profilePS5100537.90727190IPR003441NAC domain
PfamPF023654.0E-1728160IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MENHHAEQNQ LSYHDEDKYY DEIVSRLPPG YRFVPEDEEL IEKFLKVIIK NPERGRVQGI  60
FTVNLYASSP DELTAAHKPQ CEDTWYFFTK RTRKYANGSR PARAAGYGYW KQTNVVDSIN  120
YGVDEQKEPV KIGRKITLDY CYKNNGVESR TDWKMNEYRL DGKKSPDDHC SNAETPVEFD  180
EWSLCRIYKG RGSKQKNKGK QVVLQVEAEP SSGTQAIASE EHNEHFAGEA DGNSTGQSTA  240
AASNNQLSIP REQYNGLYAG GPGPSSVQQS TNLQFNNSRE WIPNYSHYMA NVASGSTNGM  300
HYTSYCLPPE FQENYPVYEN AGFVQPLRSL PPNGIPTSSS LDINQNSSSI RDHVTSEEEF  360
GFPFTDVDIT FDDFEFEKKN L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-222719617171NO APICAL MERISTEM PROTEIN
1ut4_B5e-222719617171NO APICAL MERISTEM PROTEIN
1ut7_A5e-222719617171NO APICAL MERISTEM PROTEIN
1ut7_B5e-222719617171NO APICAL MERISTEM PROTEIN
4dul_A5e-222719617171NAC domain-containing protein 19
4dul_B5e-222719617171NAC domain-containing protein 19
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017221796.10.0PREDICTED: transcription factor JUNGBRUNNEN 1-like
TrEMBLA0A175YR890.0A0A175YR89_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.21e-27NAC domain containing protein 47