 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_023600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 190aa MW: 21606.7 Da PI: 9.6922 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_023600 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.6 | 1.2e-19 | 31 | 85 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tk+q + Lee F++n++++ +++e LA++l+L+ rqV vWFqNrRa+ k
DCAR_023600 31 RKKLRLTKQQSRLLEESFRQNHTLNPKQKETLAMELKLKPRQVEVWFQNRRARSK 85
78889************************************************98 PP
|
| 2 | HD-ZIP_I/II | 117.4 | 8.2e-38 | 31 | 119 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+k+q++lLEesF+++++L+p++K++la eL+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL+keveeLr +
DCAR_023600 31 RKKLRLTKQQSRLLEESFRQNHTLNPKQKETLAMELKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLSEQNRRLQKEVEELR-A 119
69*************************************************************************************9.4 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MRDLDINQVP SEEELIEEDD QNPNHDGAPP RKKLRLTKQQ SRLLEESFRQ NHTLNPKQKE 60
TLAMELKLKP RQVEVWFQNR RARSKLKQTE MECEYLKRWF GSLSEQNRRL QKEVEELRAM 120
KVAPPTVMTS HSSDPLLAST LTMCPQCERV TTTTAQPNAG PIRPSASKPS AMAAAKVPVI 180
HSRHSSPAC*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
