PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_023181
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 336aa    MW: 37179.8 Da    PI: 9.0357
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_023181genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.35.9e-34992273130
          TCP   3 gkkdrhskihTkvg.gRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssaseceaesssssasnsssgkaaks 93 
                   kkdrhski T+ g  R+RR+Rls+++a++fF+Lqd+LG+dk+skt+ WLl++++ ai e t+       +   +  c +++s++sa  + +++a+++
  DCAR_023181  99 CKKDRHSKITTANGcSRGRRMRLSLNVAKEFFELQDMLGHDKASKTVKWLLEKSENAINEETQKrvfgmkG---S-PC-PSTSVVSAIDELQPDASRK 191
                  69***********956************************************************8774332...2.45.3444555554555555555 PP

          TCP  94 aakskksqksaasalnlakesrakarararertrekm 130
                   +++  ++k  a  ++  ++ r+kar+rar+rt +k+
  DCAR_023181 192 GKTRGGTHKLGA-SHASTRKLREKARERARKRTLQKK 227
                  554444444444.567777899*********998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.3E-30100226IPR005333Transcription factor, TCP
PROSITE profilePS5136928.031100159IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MYPYDDIQET SLFVFPDSIC ADPSSTDQDF LPSSLLNIVF PPDLLGFNHE GMLFHDELHQ  60
GGSVQEMVIP EGVCGAKKRR LSSGGSSRLR EQIRVNRRCK KDRHSKITTA NGCSRGRRMR  120
LSLNVAKEFF ELQDMLGHDK ASKTVKWLLE KSENAINEET QKRVFGMKGS PCPSTSVVSA  180
IDELQPDASR KGKTRGGTHK LGASHASTRK LREKARERAR KRTLQKKGLL LVSGFTDNYG  240
SRVDNCPQGT NAGAAFPSLS CEKSAAAGNK FLNLSTSYAA RDLEVEDIVN YSKQQPDSFE  300
GGTNTELIND HSFFISNNWN PYTIFNLHNN SGTPL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257496.10.0PREDICTED: transcription factor TCP12 isoform X1
TrEMBLA0A164UW960.0A0A164UW96_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-20TCP family protein