PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022244
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 335aa    MW: 37957.5 Da    PI: 5.037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022244genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.33.6e-15125176155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++Y+k+L+
  DCAR_022244 125 QRMTHIAVERNRRKQMNEYLSLLRSLMPES---YVQRADQASIVGGAINYVKELE 176
                  79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.86E-13123180No hitNo description
Gene3DG3DSA:4.10.280.101.7E-14124180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-17124188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.942124175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-12125176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-12130181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MALEEAIAFQ DLYSYKNSID IYDIFEGSYN WSSQCDLVQT EEQLGSLNIL ESGAENFVNN  60
TSDLSHLVES HVEQRGCNSS VEFETTEIKS APQEFPPSET STTISCRPKK RRSRNKRNLE  120
DIENQRMTHI AVERNRRKQM NEYLSLLRSL MPESYVQRAD QASIVGGAIN YVKELEHQLQ  180
CLSVQNQHNQ NFDAKDTSSP FAEFFAFPQY STSASDREKS MITDDNPWAK EGHSLSAMAD  240
IEVAMVENHA NMKIRSKSRP RQLVKLVHEL QILRLTILHL SVTSLDQIVL YSLSVKVEDD  300
CKLNSGEEIA TAVNQILAKI QIEGGCFSPN FLHQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116RSRNKR
2125136RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017255891.10.0PREDICTED: transcription factor bHLH94-like
TrEMBLA0A164VIH60.0A0A164VIH6_DAUCS; Uncharacterized protein
STRINGXP_010272971.12e-92(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19962462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-74bHLH family protein