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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_022217 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | C2H2 | ||||||||
Protein Properties | Length: 138aa MW: 15038.1 Da PI: 6.3584 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.0011 | 23 | 45 | 3 | 23 |
ETTTT.EEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCg.ksFsrksnLkrHirt.H 23 C dC+ ++F+++++L rH + H DCAR_022217 23 CFDCNnRPFRSHMDLLRHRLNdH 45 99****************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MANQHHHHNI TNGGGVHDGV FLCFDCNNRP FRSHMDLLRH RLNDHQHQHV AAQAPAPPPP 60 PVNNGMPGDE STDDELIIIL DPPPALGEPV AAVPPQGLPQ NGPIVDGHAV NEPPKCSRQW 120 RTVMLLMIVL QTVHMID* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A164VJ41 | 1e-94 | A0A164VJ41_DAUCS; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_022217 |