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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_022200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | C2H2 | ||||||||
Protein Properties | Length: 137aa MW: 14548 Da PI: 5.8153 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.3 | 0.001 | 23 | 45 | 3 | 23 |
ETTTT.EEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCg.ksFsrksnLkrHirt.H 23 C dC+ ++F+++++L rH + H DCAR_022200 23 CFDCNnRPFRSHMDLLRHRLNdH 45 99****************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MANQHHHHNI TNGGGVHDGV FLCFDCNNRP FRSHMDLLRH RLNDHQHQHV AAQAPAPPPP 60 PVNNGMPGDE STDDELIIIL DPPPALGEPV AAVPPQGLPQ NGPIVDGHAV NEPPQVQPPV 120 ENGHASNDRV ANGAHD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A164VJG9 | 6e-91 | A0A164VJG9_DAUCS; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_022200 |