PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021955
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 317aa    MW: 35030.2 Da    PI: 5.0022
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021955genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.8e-112412811055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av+Y+k Lq
  DCAR_021955 241 RKRRERINERLRTLQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 281
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.735231280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-14236296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-13237289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11237286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.94E-12240285No hitNo description
PfamPF000103.7E-8241281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MESGGAIFEN EWSSFNAMYS NEESQFMAQL FNDSSVSGDF HAGSGLIWPD HDLKGANAVD  60
IDSINASICS NYDSYCTAGD WNQMLVANTD SMSSDYCIKE AGDVLESNGF LSRDMIKDSC  120
IMEEAPPEPR KEIEFKHPVQ KSKKRCCNTG DTVQKNKRSV KPRKNQKLDL SNKIKDKDIK  180
GEAARQSLSS YSSDGENEPN AVIGGLSLAS SNSEDALDGT NGKKTRTKGG IANDPQSIYA  240
RKRRERINER LRTLQNLVPN GTKVDISTML EEAVQYVKFL QLQIKLLSSN DLWMYAPIAY  300
NGMDLGLDMN VTMPGR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017256515.10.0PREDICTED: transcription factor bHLH84-like
SwissprotQ7XHI98e-48BH084_ARATH; Transcription factor bHLH84
TrEMBLA0A161ZV160.0A0A161ZV16_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-36bHLH family protein