PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021531
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 89aa    MW: 9419.69 Da    PI: 4.2494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021531genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.5e-0718571655
                 HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 + s++  L +llP++s + ++++   +iL++++ YI+sLq
  DCAR_021531 18 LASKLLALATLLPHSSTNCATRVPALDILKETCSYINSLQ 57
                 668999********88888999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.28256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-71774IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-41857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-71974IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MSSSRTATDI ANAELDGLAS KLLALATLLP HSSTNCATRV PALDILKETC SYINSLQTEV  60
NDLSDKLSQL LASADNNVLE VLKDFLQL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257552.11e-55PREDICTED: transcription factor ILI3
TrEMBLA0A164W0D13e-54A0A164W0D1_DAUCS; Uncharacterized protein
STRINGXP_009773320.11e-16(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.15e-11bHLH family protein