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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
DCAR_021280 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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| Family |
TCP |
| Protein Properties |
Length: 307aa MW: 33932.5 Da PI: 6.9123 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_021280 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 112.5 | 6e-35 | 21 | 124 | 1 | 91 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsssg. 88
a+g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++ ++ ++ + +++ ++++s++
DCAR_021280 21 ATGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKNAIDKLEELppwnpmdasTTVPNPNLNPNGLPLEQQQSQAYp 118
589**************************************************************777766554222222222222222222222112 PP
TCP 89 ...kaa 91
+ +
DCAR_021280 119 fhdNPS 124
322222 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MGMKSNGGDI VQVEGGHILR ATGRKDRHSK VYTAKGPRDR RVRLAAHTAI QFYDVQDRLG 60
YDRPSKAVDW LINKAKNAID KLEELPPWNP MDASTTVPNP NLNPNGLPLE QQQSQAYPFH 120
DNPSDDTMKS FFPTSSGMNF HSYTGDVISR CSLQNNSQDL CLSLQSLQED INNSTHPAPG 180
HDHQGLYSGQ AETNFPRMVG WDGEIKPAGY YFNAQTLSQP QMICQSSTAA FSQREPLQSS 240
FSPYVRAWND LPFPVSDQNH TQALIPHLSI SSGSPYASAK FSGFQVPARI QGEEDHPSST 300
PTKSRN*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164). Participates in ovule develpment (PubMed:25378179). {ECO:0000269|PubMed:17307931, ECO:0000269|PubMed:25378179}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT1G53230.1 | 3e-52 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 |
| Publications
? help Back to Top |
- Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
Active suppression of a leaf meristem orchestrates determinate leaf growth.
Elife, 2017.
[PMID:27710768] - Koyama T,Sato F,Ohme-Takagi M
Roles of miR319 and TCP Transcription Factors in Leaf Development.
Plant Physiol., 2017. 175(2): p. 874-885
[PMID:28842549] - Bresso EG,Chorostecki U,Rodriguez RE,Palatnik JF,Schommer C
Spatial Control of Gene Expression by miR319-Regulated TCP Transcription Factors in Leaf Development.
Plant Physiol., 2018. 176(2): p. 1694-1708
[PMID:29133375] - Mazur MJ, et al.
Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
Front Plant Sci, 2017. 8: p. 2043
[PMID:29250092]
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