 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_021266 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
NAC |
| Protein Properties |
Length: 293aa MW: 32554.8 Da PI: 9.8286 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_021266 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 104 | 2e-32 | 64 | 206 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgy 82
lp+G++F+P+d+el+ e+L++kv+++ ++ e +++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +
DCAR_021266 64 LPAGVKFDPSDQELL-EHLEAKVRSDArklhplID--EfipTLEGEnGICYAHPEKLP-GVSKDGFIRHFFHRPSKAYTTGTRKRRKVHadidgnETR 157
799************.99******99956643322..22222333336**********.554555577******************844455455889 PP
NAM 83 Wkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
W++tgk+++v+ ++ +g kk+Lv+y g+++k+ekt+Wvmh+y+l
DCAR_021266 158 WHKTGKTRAVFIDqGKVIKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 206
**********998345558*********6657999999*********98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MTWCTDCSDD AMAIVRKSSP PPPATVLTVA SNESPTHNRV KACPSCGHQI KWQEKGGIHN 60
LPGLPAGVKF DPSDQELLEH LEAKVRSDAR KLHPLIDEFI PTLEGENGIC YAHPEKLPGV 120
SKDGFIRHFF HRPSKAYTTG TRKRRKVHAD IDGNETRWHK TGKTRAVFID QGKVIKGYKK 180
ILVLYTNYGK QRKPEKTNWV MHQYHLGNND DEKDGELVVS KIFFQTQPRQ CSSSSTTSAV 240
NLRRSAPILP KDTVAVNTNT PGNAGGSSLK NNSAVFVDYY NQSLISFKQT TS*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
