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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_020998 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 183aa MW: 21447.6 Da PI: 9.9777 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_020998 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.2 | 5.9e-18 | 18 | 74 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
r k+ ++t+eq++ Le+ F+ n+ + +++ +LA++l+++ rq+ +W+qN+Ra++k+
DCAR_020998 18 RNKKKRLTQEQVRLLEASFNGNNRLEPDRKLQLAHELDIPPRQIAIWYQNKRARWKN 74
567889*************************************************95 PP
|
| 2 | HD-ZIP_I/II | 104.7 | 7.3e-34 | 19 | 111 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+kk+rl++eqv+lLE sF+ +++Lep+rK +la+eL++ prq+a+W+qn+RAR+k++ lE dy+aL+ +++a +++++Leke ++Lr el++
DCAR_020998 19 NKKKRLTQEQVRLLEASFNGNNRLEPDRKLQLAHELDIPPRQIAIWYQNKRARWKNQSLELDYTALHMRLEAELTQKKQLEKEAQRLRIELQR 111
59**************************************************************************************99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009637 | Biological Process | response to blue light |
| GO:0009646 | Biological Process | response to absence of light |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MMKNIFKNSE NRKHCTSRNK KKRLTQEQVR LLEASFNGNN RLEPDRKLQL AHELDIPPRQ 60
IAIWYQNKRA RWKNQSLELD YTALHMRLEA ELTQKKQLEK EAQRLRIELQ RLKTEISIKQ 120
QVQMFQPQPP LASVSSISSN CDELRSSSLR EEQVNCSWMH DQALRVEEFY ACLIGGNGSN 180
LI*
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