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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
DCAR_019849 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family |
HD-ZIP |
Protein Properties |
Length: 298aa MW: 33887.1 Da PI: 8.824 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_019849 | genome | ARS-USDA | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60 | 3.7e-19 | 154 | 208 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tk+q Le+ F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
DCAR_019849 154 RKKLRLTKDQSAFLEDSFKEHHTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 208
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 128 | 4e-41 | 154 | 244 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rl+k+q+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
DCAR_019849 154 RKKLRLTKDQSAFLEDSFKEHHTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 244
69*************************************************************************************9.555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MELGLSLGET QKQPFRLFGK SNETVKKLDD GLGFCMGLAL SVSDEMTSKR VDRLTTDDHS 60 PSVELHLVPF STHHKPSHQL PFPWLSHNQI NLTSERINAE GGGTDSSSPD SSSFHMYRNR 120 RHNHKREDGH VETERDSNSR GGSDDEDNGL ILSRKKLRLT KDQSAFLEDS FKEHHTLNPK 180 QKQALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEYLK RCCETLTEEN RRLQKELQEL 240 RALKSSKPFY MQLPATTLTM CPSCERVAST TTVTATATKP RLHPFLQDQG HALHASS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 152 | 158 | SRKKLRL |
2 | 202 | 210 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-42 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |