 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
DCAR_018742 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
C2H2 |
| Protein Properties |
Length: 284aa MW: 30425.4 Da PI: 4.7265 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_018742 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14 | 0.00014 | 258 | 280 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+C+ C+k+F++ L++H + H
DCAR_018742 258 TCSSCSKTFNSEKGLESHSKAkH 280
7*****************88777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MEFWGVEVKA GEKVPVPVES GHLIHVSQVA LGDVKNAKAA NYVPVRMTVE GKKFVIGTLS 60
ADKGPQISFD LVLDKDFELS HDWKDGSIYF CGYSAEQYPF ADGFYDEEDS SDEEEIELEN 120
GKPVPAIPAA KATESKAAAT KPGSSAKPKV TVVEPKKDES EDDSDDSDDS ESDPLEDDSS 180
DDDDMSEDEE TPQKVEPPSK KRPASSAVKT PASTKKAKTE TPQKTDGKKA SVHTATPHPK 240
KKSEKKTTES PKSSGGVTCS SCSKTFNSEK GLESHSKAKH GGK*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ147989 | 4e-79 | FJ147989.1 Daucus carota subsp. sativus clone BAC C144G02 genomic sequence. |
