PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017382
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family C2H2
Protein Properties Length: 434aa    MW: 47736.7 Da    PI: 9.9198
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017382genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.2e-05209231223
                  EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                  +Cp Cg+ F  ++nL+ H+ + H
  DCAR_017382 209 SCPQCGEIFMKPENLELHQTVrH 231
                  8******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.974208236IPR007087Zinc finger, C2H2
PROSITE patternPS000280208231IPR007087Zinc finger, C2H2
SuperFamilySSF563997.96E-24233431No hitNo description
Gene3DG3DSA:3.90.228.103.8E-14235430IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MAKTSKPKKT TKQNHKISNQ TKAPKQNQTN TSLPKPEKPA SWAVVRSLFT CKHLQAQQQQ  60
QPQIQENEKQ KQPPPPPPPP PPQQQQQQQK QLKQEQLNED NKKNKKMNCS GSSLCSNTKV  120
MHRPETSSST SPENMKKRAA AAMNIDGSSS SRSMKTPLKE FNGSSSSSLS SPLRGIPFRK  180
LSGCYECRMV VDPVLGFTRD PSLRATICSC PQCGEIFMKP ENLELHQTVR HAVSELGPED  240
TSKNIVEIIF QSSWLRKQQS PVCKIDRILK IQNTPKTISK FEEYRDSIKT KATKLPKKHP  300
RCIADGNELL RFHCTTFMCS LGLNGSSNLC NSIPHCGVCS IIKNGFKVAG NGILTTATSG  360
KAHDDSGVGP ENEKRAMLVC RVIAGKVKKG EEGGSEEYDS VAGAAGVYAN FDELYVFNAK  420
AILPCFVVIY GGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251244.10.0PREDICTED: uncharacterized protein LOC108221897
TrEMBLA0A164Y8J50.0A0A164Y8J5_DAUCS; Uncharacterized protein
STRINGVIT_18s0001g03670.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107231517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-94C2H2-like zinc finger protein