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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_016661 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
NAC |
| Protein Properties |
Length: 267aa MW: 30261.3 Da PI: 8.7756 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_016661 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.3 | 2.5e-52 | 9 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98
lppGfrFhPtd+elv++yL++k++++++++ +ike+d+yk++PwdLp + ++kewyfFs+r++ky++g+r+nra+ sgyWkatg dk++ s +
DCAR_016661 9 LPPGFRFHPTDDELVMHYLCRKCASQQIDV-PIIKELDLYKHDPWDLPGLALYGDKEWYFFSPRERKYPNGSRPNRAAGSGYWKATGADKAIGS--PK 103
79****************************.88***************6555689*************************************99..77 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128
+vg+kk Lvfy g+ p+g+kt+W+mheyrl
DCAR_016661 104 TVGIKKALVFYAGKPPRGQKTNWIMHEYRL 133
8***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MAGAVDLQLP PGFRFHPTDD ELVMHYLCRK CASQQIDVPI IKELDLYKHD PWDLPGLALY 60
GDKEWYFFSP RERKYPNGSR PNRAAGSGYW KATGADKAIG SPKTVGIKKA LVFYAGKPPR 120
GQKTNWIMHE YRLAQVDRSA KNKNQRGSKL DDWVLCRIYN KKGSLEKHNA NRAAANDMAY 180
LDTSDSVPKL HTDSSCSEQV VSTELREVES QPKLESTTLE YPHNYMPAPA DFMLSAPRQP 240
PQPQSATSTY EMAQWQDVFM YLQRSL*
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| Publications
? help Back to Top |
- Florentin A,Damri M,Grafi G
Stress induces plant somatic cells to acquire some features of stem cells accompanied by selective chromatin reorganization.
Dev. Dyn., 2013. 242(10): p. 1121-33
[PMID:23798027] - Jensen MK, et al.
ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.
FEBS Open Bio, 2013. 3: p. 321-7
[PMID:23951554] - Wang YX
Characterization of a novel Medicago sativa NAC transcription factor gene involved in response to drought stress.
Mol. Biol. Rep., 2013. 40(11): p. 6451-8
[PMID:24057250] - Yang X, et al.
Overexpression of a Miscanthus lutarioriparius NAC gene MlNAC5 confers enhanced drought and cold tolerance in Arabidopsis.
Plant Cell Rep., 2015. 34(6): p. 943-58
[PMID:25666276] - Du Q,Wang H
The role of HD-ZIP III transcription factors and miR165/166 in vascular development and secondary cell wall formation.
Plant Signal Behav, 2015. 10(10): p. e1078955
[PMID:26340415] - Takasaki H, et al.
SNAC-As, stress-responsive NAC transcription factors, mediate ABA-inducible leaf senescence.
Plant J., 2015. 84(6): p. 1114-23
[PMID:26518251] - Liu Y,Sun J,Wu Y
Arabidopsis ATAF1 enhances the tolerance to salt stress and ABA in transgenic rice.
J. Plant Res., 2016. 129(5): p. 955-962
[PMID:27216423] - Ghandchi FP,Caetano-Anolles G,Clough SJ,Ort DR
Investigating the Control of Chlorophyll Degradation by Genomic Correlation Mining.
PLoS ONE, 2016. 11(9): p. e0162327
[PMID:27618630] - Zhao J,Missihoun TD,Bartels D
The ATAF1 transcription factor is a key regulator of aldehyde dehydrogenase 7B4 (ALDH7B4) gene expression in Arabidopsis thaliana.
Planta, 2018. 248(4): p. 1017-1027
[PMID:30027414]
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