PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015700
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 384aa    MW: 41921.7 Da    PI: 7.0443
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015700genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57392.64.2e-29169263298
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                  +f+r+++e+Deiv+L G+i++k ++gk   d    + efv++s+s  v++s +++KirrLKkK+ ++v k k+g++p+fsk+h+ k+f+lskkiWgs
  DCAR_015700 169 TFRRVFTEKDEIVMLEGIIEYK-ENGKG-ADSSLSMAEFVEDSLSCSVTRSKISDKIRRLKKKYLNNVGKGKDGEDPVFSKPHEYKVFQLSKKIWGS 263
                  699******************5.44433.444556778899******************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.0E-26170262IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MAPKRKADDL PPPSSESVDE EHSTSSDDSD SIPQQLTQPK PQKTNQESEE SEESGESEET  60
DSDSDASSEK TQKPNSAVSP PALKPAQLKP NGKRAAENDQ IGKGSMGKKS KTADEGLKAV  120
KKVGKGSKSD DNVDKGLKSD KGKSVKKDSK KGEISKGDDG ENEDKKADTF RRVFTEKDEI  180
VMLEGIIEYK ENGKGADSSL SMAEFVEDSL SCSVTRSKIS DKIRRLKKKY LNNVGKGKDG  240
EDPVFSKPHE YKVFQLSKKI WGSGGWGSGD SRPRSSRTTK KKDDNVGSEI AVGNEVEMED  300
CWSLYPCLCA SLESEMVKNI SGPVTPKEHV KKVVSGLEKE KAKELEQEWK GVVMFELQVY  360
AKRKNVIAKQ AVAAVNALHP QNH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017243954.10.0PREDICTED: mediator-associated protein 1-like
TrEMBLA0A165A5B40.0A0A165A5B4_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-22DNA-binding storekeeper protein-related transcriptional regulator