PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015681
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 442aa    MW: 48564.6 Da    PI: 7.0485
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015681genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10391436655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri  ++ +L++l P+     +k  + a++L +Av YIk+Lq
  DCAR_015681 391 SIAERVRRTRISARMKKLQDLFPNM----DKQANTADMLDLAVVYIKDLQ 436
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5001110.1531104IPR000719Protein kinase domain
SuperFamilySSF561122.38E-13241IPR011009Protein kinase-like domain
Gene3DG3DSA:1.10.510.101.4E-14289No hitNo description
PfamPF000692.3E-9248IPR000719Protein kinase domain
PROSITE profilePS5088813.351385435IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-12388440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.02E-10389440No hitNo description
Gene3DG3DSA:4.10.280.101.5E-11390440IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-10391441IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-6391436IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MEYMSPEIIL GKGHDKAADW WSVGILLFEM LTGKLLIIMY NVEGSMESLL AATNFMFPSP  60
AADHFAKNKE TVHSETCNFM NNHDSPQPQS LNLSRYQSVP SSFLESLVND SAVAADYRSS  120
NIETEMKFSD PGDCKYTKGL GTDSSKNLLS SGVENLFRGF GSNVGGENMN QVKKETSNGS  180
RLSLVRQSSS PAGFSSSLAD DDIGSVWISV ESTFISLFVL DLYCKLLTRG LITGFTGMND  240
LGNFRSCNKT KAGLSSSTNR LGMNFSSVPS SHSRFMPQSA ANVNENFGTS ELYSANGHSG  300
GNFNGPNLYN DPNCNSLKRN RDGEAKMLSS LPGLNKQNDD FNHYTSGLVH QLSLPSTSAE  360
MATMENFLHF QQDSIPCKIR AKRGFATHPR SIAERVRRTR ISARMKKLQD LFPNMDKQAN  420
TADMLDLAVV YIKDLQKEVQ V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017244600.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A165A5N80.0A0A165A5N8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-41bHLH family protein