PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_013173
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 353aa    MW: 39755.4 Da    PI: 8.3694
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_013173genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.79e-1276105433
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                  +k +rr+++NReAAr+sR+RKka++++Le+
  DCAR_013173  76 DKLQRRLAQNREAARKSRLRKKAYVQQLET 105
                  89**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001373126IPR004827Basic-leucine zipper domain
PfamPF001701.3E-876106IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.6E-877107No hitNo description
SuperFamilySSF579594.5E-777108No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141441.2E-26158231IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MASPSTQFAT TRRMGMYDPL HHISTWEDIL GAESSVNITS SCTILQADTR LLNKSYTSQE  60
SLGELSDNQA GRTKCDKLQR RLAQNREAAR KSRLRKKAYV QQLETSRLKL AQLELEIDRT  120
KQGLYTGGAG HSGTINSGII SFEIEYGLWV ELQEKKNCQL RNVLQAQISE KELRVHVEGG  180
LAHFSDLFRM KAEAAKADVF HVMHGMYRSP LERLFLWIGG FKPSEVIQIL VPQLEPLTEQ  240
QLVDVYKLRH SCQQAEDALS QGMEKLVQTL AQCVVLDNIA GGSYGSRMAS AMERLESLEC  300
FMNQADHLRQ QTLQQMSRIL TTSQAARGLL AFGEYFQRLR ALSSLWAVHP HL*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017243503.10.0PREDICTED: transcription factor TGA1-like
RefseqXP_017243504.10.0PREDICTED: transcription factor TGA1-like
SwissprotQ392371e-131TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A165Z0H50.0A0A165Z0H5_DAUCS; Uncharacterized protein
STRINGXP_009588814.11e-160(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-133bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]