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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
DCAR_012904 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family |
WRKY |
Protein Properties |
Length: 532aa MW: 58631.6 Da PI: 6.4249 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_012904 | genome | ARS-USDA | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 88.6 | 5.4e-28 | 251 | 308 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK v+g++f rsYY+Ct+ +Cp+kk+ver++ ++++++i +g+H+h+k
DCAR_012904 251 EDGYNWRKYGQKLVRGNQFVRSYYKCTFLSCPAKKQVERTH-EGNITNINCRGNHEHPK 308
7***************************************9.***************85 PP
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2 | WRKY | 102.7 | 2.1e-32 | 424 | 482 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK vkg+ +prsYYrC+ +gCpvkk+ver+++d kvv++tYeg+H+h+
DCAR_012904 424 VNDGYRWRKYGQKLVKGNANPRSYYRCSNTGCPVKKHVERASHDSKVVITTYEGQHDHT 482
58********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MLKAHVVTSR EGMPDAISVD KYQQGENPDA VFHDSVSNQK EIPPSGVHDK EEQGNLQQRQ 60 KPSEAGASQV SQEVSIGRVE SEKLPNNLKP VQSLDDITDA SQSNQDGSSI SMVHETEPVS 120 LHQGHSYDSA IRTSESCQEG SSLSTIPELE LDNSLPTQSL GTIILTSKTA EHGTALSTVP 180 ENVQDTLQQN QDPDTCLSVS KSDQEKSSLS IMQEKVLEKL PLRRNPDIGV QPLQSVQEGS 240 PRSKLPEKPS EDGYNWRKYG QKLVRGNQFV RSYYKCTFLS CPAKKQVERT HEGNITNINC 300 RGNHEHPKPQ QSPQTPVPLQ AKRPEKSPVT RSEDETTDVH KEIPHQIVLI ETPKPLRVQA 360 SVDVMESSAS KSNKTKDRVD QDADPESKRR KRDNSTSDDV LSSANRTNGG TRIVIQSTSL 420 VDIVNDGYRW RKYGQKLVKG NANPRSYYRC SNTGCPVKKH VERASHDSKV VITTYEGQHD 480 HTMPSARTVT HNTSGADTNA NPQNGEARSD TEEKETPTSG LEMVVHVGAS E*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
2ayd_A | 5e-35 | 252 | 484 | 1 | 74 | WRKY transcription factor 1 |