PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_010957
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TALE
Protein Properties Length: 704aa    MW: 76324.3 Da    PI: 6.7659
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_010957genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-095115481954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yps +++  LA+++gL+ +qV++WF N R +
  DCAR_010957 511 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 548
                  664559******************************88 PP

2BELL95.45.1e-313874411872
         BELL  18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                  +Vd+rY++y++q+q+v++sF++v+g+g+a pYt+lA+ka+SrhFrcLkdaia qi
  DCAR_010957 387 KVDRRYSHYCQQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAIAAQI 441
                  7****************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.0E-62315439IPR006563POX domain
PfamPF075262.9E-38320438IPR006563POX domain
PROSITE profilePS5007112.568489552IPR001356Homeobox domain
SMARTSM003892.0E-9492556IPR001356Homeobox domain
CDDcd000863.56E-13492553No hitNo description
SuperFamilySSF466894.71E-17493559IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-28495558IPR009057Homeodomain-like
PfamPF059203.5E-18509548IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
MSQDYHHQAA GGIFSFSNGY ERSQEEQRDK VLRGQGFEPP PPLVAMDEEG GEETGGGLHG  60
YDQTAGLLSE MFNFPSGAAT ATELLQQQIS GNYHGHIMRP SSSHLHREAT GPSHENWYTG  120
NEHKSSHIVN QQHIGPSINA SDSAAAAMQL FHMNPSSARS PSPPPSTLHM LLPNPSPNPT  180
SNSLHQGFHS PGAFGPSSHQ QQFTWGTPGS TGHDAGSTST TGQLTPHHHP IIEGHGQGLS  240
LSLSSSLQHL EAAKAEEFRN AGGSGGMLFF NQGGGGPNTN SQFHNQALQL QGTEVVLGAQ  300
NQPIHHVGFR SSSSLGVVNV LRTSKYVKAA QELLEEFCSV GRGQFKKNKF PKPPNPTGSS  360
GAGTSTSSAK DPPPLSASDR IEHQRRKVDR RYSHYCQQMQ MVVNSFDVVM GYGAAVPYTA  420
LAQKAMSRHF RCLKDAIAAQ IKHSCELLGE KDAAGTSGVT KGETPRLKLL EQSLRQQRAF  480
HQMGGMLEQE AWRPQRGLPE RSVNILRAWL FEHFLHPYPS DADKHLLARQ TGLSRNQVSN  540
WFINARVRLW KPMVEDMYQQ ESKEEGDEDE ETETNAQTPM QSSTLASTAP SFTSTPPSTT  600
VPINAPESDP SLLAINTTFS ENQPPSHLYS ASTTPLSTVT CHRRGDPEYT AAPNAEDHSN  660
NMGSTLISFG ANATGDVSLT LGLRHVGNMP EKNPFSVRDF EGC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A2e-16498555158Homeobox protein Meis1
4xrs_B2e-16498555158Homeobox protein Meis1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017242924.10.0PREDICTED: BEL1-like homeodomain protein 2
RefseqXP_017242925.10.0PREDICTED: BEL1-like homeodomain protein 2
RefseqXP_017242926.10.0PREDICTED: BEL1-like homeodomain protein 2
SwissprotQ9SW801e-164BLH2_ARATH; BEL1-like homeodomain protein 2
TrEMBLA0A162AK020.0A0A162AK02_DAUCS; Uncharacterized protein
STRINGGorai.007G207200.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33412139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23760.31e-139BEL1-like homeodomain 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]