PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_010801 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 192aa MW: 22439.2 Da PI: 10.0213 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38 | 3.5e-12 | 88 | 130 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 ++ rr+ +NRe+ArrsR RK++ +++L+++v L+ eN+++ + DCAR_010801 88 RKRRRMVSNRESARRSRMRKQKHLDNLRNRVNRLKIENQDMLN 130 5779999*******************************99874 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.3E-11 | 84 | 148 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-10 | 86 | 128 | No hit | No description |
PROSITE profile | PS50217 | 10.381 | 86 | 149 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.16E-10 | 88 | 136 | No hit | No description |
Pfam | PF00170 | 1.4E-9 | 88 | 145 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.18E-18 | 89 | 138 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 91 | 106 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MLVSEGVFET LFPEFEGGFT PWNDQEPTFF LDHQDQGSVF SPTPLQEPVF SNSGSDNSDR 60 SISGSVVTNK KRDSPDSVLN HLPVIDERKR RRMVSNRESA RRSRMRKQKH LDNLRNRVNR 120 LKIENQDMLN GLRWVAHHSQ LVRTENERLR SESHMLRQKM RDMHQLLLAR HIQEQLFSVA 180 WPCNNVTHIN E* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 91 | KKRDSPDSVLNHLPVIDERKRRR |
2 | 87 | 91 | RKRRR |
3 | 87 | 108 | RKRRRMVSNRESARRSRMRKQK |
4 | 100 | 107 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017240582.1 | 1e-139 | PREDICTED: basic leucine zipper 43 | ||||
TrEMBL | A0A161XZ39 | 1e-138 | A0A161XZ39_DAUCS; Uncharacterized protein | ||||
STRING | EOX91751 | 5e-52 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 1e-28 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_010801 |