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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
DCAR_010715 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family |
C3H |
Protein Properties |
Length: 382aa MW: 42816.9 Da PI: 8.5489 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_010715 | genome | ARS-USDA | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 44.3 | 3e-14 | 303 | 328 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26
+ktelC+ + ++G+C+yG++C+FaHg
DCAR_010715 303 QKTELCNKWEESGECPYGNNCRFAHG 328
69***********************8 PP
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2 | zf-CCCH | 22.1 | 2.6e-07 | 341 | 366 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26
ykte+Cr f ++ C+yG rC+F H+
DCAR_010715 341 YKTEICRMFIAGNKCPYGHRCHFRHP 366
9**********99**********998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MSNENNNSSS NNSNSGTTAA NIVSSSSSNS SPRRLHSINI INDVTNSIDP FYNSPTTCSS 60 YNQFLPSDDE YFSTFNPCIN DFLLSTNTNS LSNSPSSDDL SFDHFSNAIA AQNRLNQANF 120 ILENNHLHDY SYTTYLSTLY KSIKQLNALR QENENLRLAN ADLVSRINLL SQAHGRVSSS 180 RPFLNNNYNS HNSVGDTRAI TKSSVSPTSV IQQNNLDKRN HRRSAAVHPK NISVRSANHL 240 KTNDQRGDIT GNMSRANPNS NTYQQGITTA PSLNQQRRAY LNGVKRELEG FEMDIEVYNQ 300 GMQKTELCNK WEESGECPYG NNCRFAHGIA ELRPVIRHPR YKTEICRMFI AGNKCPYGHR 360 CHFRHPSTAH QDILQAHASF N*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1rgo_A | 3e-22 | 304 | 365 | 5 | 66 | Butyrate response factor 2 |