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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_009857 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 251aa MW: 28747.7 Da PI: 7.0229 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.1 | 5.2e-10 | 83 | 131 | 2 | 50 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 + +k+ rr ++NR AA rsR+RKk +++eLe k+k +e+e k+L l+ DCAR_009857 83 PNSKKKRRQERNRDAAFRSRERKKLYVKELEMKSKYFEEECKRLGMMLN 131 5789************************************999976665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-12 | 76 | 144 | No hit | No description |
SMART | SM00338 | 0.0023 | 80 | 146 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.266 | 84 | 147 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.0E-8 | 85 | 140 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-10 | 86 | 142 | No hit | No description |
CDD | cd14704 | 4.18E-12 | 87 | 138 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 89 | 104 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MSDHGGEENE EKNEEDDDDR IKNLELEQLL ALPNDEEWDL SDSEFFNFFQ GWQNVPSPSL 60 LAAAPLDNQP IIHHQNNPTQ DDPNSKKKRR QERNRDAAFR SRERKKLYVK ELEMKSKYFE 120 EECKRLGMML NCVAAENHAL RLSLQTRTAS DVSRTKQESA VLFLESLLLG SLLWFLGVMC 180 LVNLPEHLLP KKEVPLGNMD NQNQGILAPR KTGSNILKLQ CFPSSVRGKR CKASRTRMKL 240 SFSFAQQALM * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 89 | KKKRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017242610.1 | 0.0 | PREDICTED: bZIP transcription factor 60-like | ||||
TrEMBL | A0A162AHE2 | 0.0 | A0A162AHE2_DAUCS; Uncharacterized protein | ||||
STRING | XP_009608063.1 | 8e-46 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7101 | 21 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 2e-15 | basic region/leucine zipper motif 60 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_009857 |