PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_009765

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

bZIP

Protein Properties

Length: 318aa MW: 35795.8 Da PI: 6.2345

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_009765	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.9e-10	177	221	4	48
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++r +r NR +A+rsR RK+++i eLe v +L+ae + L + DCAR_009765 177 SRRVKRILANRQSAQRSRVRKLQYISELEHGVNSLQAEISVLSPR 221 6789999******************************98777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-12	174	238	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	7.9E-10	176	223	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.393	176	228	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.1E-11	178	232	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.3E-13	178	229	No hit	No description
CDD	cd14703	8.51E-23	179	229	No hit	No description
PROSITE pattern	PS00036	0	181	196	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MAQLPPKVPN MAPNLAGLSS YSHHQKLPSM ENLNSLQSHP WVDDYLNFSS STKRRSHRRS 60 ASDSIAFLEQ VSVDHEEECK VRPLAPGFRT SHAAAAQEFD QFDEEQFMAM FTDDEAVDLT 120 VICSSPSSPS HHNCNIEDDQ QMQLGNGFRS GSTLDGQNAA GDGVATIDNY NDRNFDSRRV 180 KRILANRQSA QRSRVRKLQY ISELEHGVNS LQAEISVLSP RVAFLDHQRL VLNVDNSVLR 240 QRIAALSQDK IFKDGHQEAL KMEIERLRQV FNYQQSVKKT DDDDTTLPLA ESLVQTSPEK 300 VTKHPNCSSF NDQIMIR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	56	KRRSH

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269\|PubMed:17719007, ECO:0000269\|PubMed:19449183}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017238170.1	0.0	PREDICTED: basic leucine zipper 34-like
Swissprot	F4IN23	1e-74	BZP34_ARATH; Basic leucine zipper 34
TrEMBL	A0A162AHL2	0.0	A0A162AHL2_DAUCS; Uncharacterized protein
STRING	XP_004303124.1	1e-93	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1775	24	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	4e-67	bZIP family protein

Link Out ? help Back to Top
Phytozome	DCAR_009765

Publications ? help Back to Top
Jiang J,Zhang Z,Cao J Pollen wall development: the associated enzymes and metabolic pathways. Plant Biol (Stuttg), 2013. 15(2): p. 249-63 [PMID:23252839] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]