PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_008114 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26291.8 Da PI: 7.2168 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.5 | 5e-13 | 82 | 128 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N++f+eL ++l + + +K +Ka iL A++ +++L DCAR_008114 82 KACREKMRRDRLNDKFQELSSILEPG---RTPKTDKAIILSNAIRMVNQL 128 678**********************8...8****************9999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.849 | 77 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-10 | 81 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.11E-10 | 81 | 131 | No hit | No description |
SMART | SM00353 | 2.6E-10 | 83 | 134 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-13 | 83 | 151 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.3E-14 | 84 | 150 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MLSTEENNSN WMFGYGLLDS VPVPGGDFPS FQAHFQWHAN DFTDTTGLSP EFGDSLGSSD 60 AFKEHGSRKR MKSGSCSISG SKACREKMRR DRLNDKFQEL SSILEPGRTP KTDKAIILSN 120 AIRMVNQLRD EAKKLKESHD ALQDKLNELK AEKTELRDEK QKLKAEKEIL EQQVKAFHPQ 180 PGFLPPAVVP SPFAGASQIS GGKMMPFMGY PGVPMWQFTT PAAVDTAQDH VLHSPVA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017234648.1 | 1e-178 | PREDICTED: transcription factor bHLH115-like | ||||
Swissprot | Q9C682 | 2e-78 | BH115_ARATH; Transcription factor bHLH115 | ||||
TrEMBL | A0A166F2Z5 | 1e-176 | A0A166F2Z5_DAUCS; Uncharacterized protein | ||||
STRING | EMJ13136 | 1e-105 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA950 | 24 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51070.1 | 9e-81 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_008114 |
Publications ? help Back to Top | |||
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