 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_006595 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
NF-YC |
| Protein Properties |
Length: 285aa MW: 31129.2 Da PI: 4.8083 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_006595 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 58.6 | 1.3e-18 | 6 | 86 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
++++P arikki++adedv +i+ +Pvl+ska elf+ +l r++ + ++ +t+ ++ +v++ ++fdfl ++v +
DCAR_006595 6 DTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQKGAKTVSSLHLKHCVQSYNVFDFLKEVVSK 86
5789************************************************************************99976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MRKKLDTRFP AARIKKIMQA DEDVGKIAMA VPVLVSKALE LFLQDLCDRT YDITLQKGAK 60
TVSSLHLKHC VQSYNVFDFL KEVVSKVPDY THSEAGGDDA NVTKRRKVTS EEANDSDEES 120
KRNRMHEASH VSSSSKGRGR GRGRGRGRGR SARSAADKEA SQTEFDSESC NNNQNLVPGA 180
ATGVVDEGSE LKELPKDSIN VDNGSNSAPR NFDLNADLDE NVVDKTPTEA TGCLPSAKPA 240
VPKSEDEYPG WSLSEVDRIA IDPAHLAQLN SRMDDDDEDY DEEG*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 139 | 148 | RGRGRGRGRG |
| 2 | 139 | 149 | RGRGRGRGRGR |
