 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
DCAR_006054 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
NAC |
| Protein Properties |
Length: 298aa MW: 33733 Da PI: 9.29 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_006054 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 114.5 | 1.1e-35 | 11 | 109 | 30 | 128 |
NAM 30 leevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126
+ v++++++y+++PwdLp+k +e+ewyfF++rd+ky++g r+nr+++sg+Wkatg+dk++ls+ +++ +g+kk Lvfy+gr pkg+ktdW+m ey
DCAR_006054 11 A-PVVADIELYNYNPWDLPNKSLFGEDEWYFFTPRDRKYPNGARPNRTAASGFWKATGTDKPILSAsGSRRIGVKKALVFYTGRPPKGVKTDWIMTEY 107
4.56999************87778999*************************************9977888*************************** PP
NAM 127 rl 128
rl
DCAR_006054 108 RL 109
98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MKRLRSCPLP APVVADIELY NYNPWDLPNK SLFGEDEWYF FTPRDRKYPN GARPNRTAAS 60
GFWKATGTDK PILSASGSRR IGVKKALVFY TGRPPKGVKT DWIMTEYRLP DTTTRPSRSK 120
GSMRLDDWVL CRIRQKGNNS KNSWTVEDDY NSSPPSRFVH TNYMPKIEEL PSAYIATNNT 180
PLDSYPFKDC QILKASMLSS QGLPDPVQTM TYNVNNSKFI TTSFFDDFLK PKFVNEIGSL 240
SGSNKTVTDV MSENDMGNMM STNTISFYNQ NQAQGNYFYN PTPSDAIMSL LLSHEGY*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-55 | 13 | 142 | 48 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-55 | 13 | 142 | 48 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-55 | 13 | 142 | 48 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-55 | 13 | 142 | 48 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-55 | 13 | 142 | 48 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-55 | 13 | 142 | 48 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}. |
