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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
DCAR_004891 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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| Family |
GRAS |
| Protein Properties |
Length: 539aa MW: 60251.8 Da PI: 5.9035 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_004891 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 403.2 | 2.5e-123 | 169 | 538 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99
+++L++cAea+++gd + + l++ l+ ++s +gdpmqRl ay++e+++ar+++s+s +yk+l+++e + sse ++++ + +++ P++kf+++ N
DCAR_004891 169 KQVLVACAEAIADGDVSSVAPLINVLERMVSVTGDPMQRLGAYMMEGIKARMLSSGSIIYKKLKCNEPT---SSELMSYMGVIYQIVPFYKFAYMSSN 263
689*****************************************************************9...999999******************** PP
GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
I eave e +HiiDf+i qG QW++L+qaL+sRp+gpp +R+Tgv++++s + l+ +gerL+k+Ae++gvpfef+ +a + ++++ e+Lr
DCAR_004891 264 VIIKEAVEYEPVIHIIDFQIAQGSQWVSLIQALSSRPGGPPIVRVTGVDDSNSAyaRGGGLQLVGERLTKVAESCGVPFEFHG-AAINGSEVKRENLR 360
**************************************************988899999************************.899*********** PP
GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
+++gEal+Vn+ + lh+++desvs++++rd++L+l+kslsPkvv++veqe+++n+++Fl rf e+l+yy+a+f++++a+ +r++++ri+ E+++++r+
DCAR_004891 361 IRQGEALVVNFPYVLHHMPDESVSTANHRDRLLRLIKSLSPKVVTLVEQESNTNTSPFLLRFRETLDYYTAMFEAIDASRSRDDRQRISAEEHCVARD 458
************************************************************************************************** PP
GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
ivn++aceg+er+erhe ++kW++rl++aG+++ +ls+++ ++ +l+++++ +r+e+++g+l+l Wk+r Lv++SaWr
DCAR_004891 459 IVNMIACEGEERVERHELFGKWSSRLRMAGYTQCQLSHTVGGVVQDMLKEYSGY-FRLEHRDGALYLRWKNRDLVTCSAWR 538
****************************************************65.*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 539 aa
Download sequence Send
to blast |
MQTFHGSQSS GTTQRLYYQP MQQVEPYWIQ NKKASSDNSS QETAHSSPHD EQFFTLDSSP 60
ADYVTYDSPS VASISSNRSP FSSQYSQSYR SDQHQSPENT YGSPVSGSSM IDDGNALKHI 120
LKELESKLLG PESEADDVCS YSFNSATPEV TSLTKYDRLL QMVPSLDVKQ VLVACAEAIA 180
DGDVSSVAPL INVLERMVSV TGDPMQRLGA YMMEGIKARM LSSGSIIYKK LKCNEPTSSE 240
LMSYMGVIYQ IVPFYKFAYM SSNVIIKEAV EYEPVIHIID FQIAQGSQWV SLIQALSSRP 300
GGPPIVRVTG VDDSNSAYAR GGGLQLVGER LTKVAESCGV PFEFHGAAIN GSEVKRENLR 360
IRQGEALVVN FPYVLHHMPD ESVSTANHRD RLLRLIKSLS PKVVTLVEQE SNTNTSPFLL 420
RFRETLDYYT AMFEAIDASR SRDDRQRISA EEHCVARDIV NMIACEGEER VERHELFGKW 480
SSRLRMAGYT QCQLSHTVGG VVQDMLKEYS GYFRLEHRDG ALYLRWKNRD LVTCSAWR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
