 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_004562 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
Trihelix |
| Protein Properties |
Length: 266aa MW: 30178.1 Da PI: 6.1792 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_004562 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 33.2 | 1.4e-10 | 17 | 81 | 2 | 66 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66
Wt+qe l L++ + +e++ ++ + ++W+ + +++++ g++rs +qCk+kw+ l +y ++++
DCAR_004562 17 WTHQEHLILVNEITAVERDCLNTFSSFQKWQIIVENCHALGLNRSLNQCKKKWNTLFDDYNELRN 81
***********************9************************************98876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MSNSTTLRTR SQAAPDWTHQ EHLILVNEIT AVERDCLNTF SSFQKWQIIV ENCHALGLNR 60
SLNQCKKKWN TLFDDYNELR NFDAEVYGAI EEFVRVRDGR GELGSDPDLD PGDELLVDVV 120
ANAHSVLPHA KKYKLKSMPK KHFLEGWGAR RKSSKNVRKP NKSCRSEVKV EVECPKESVD 180
VKSMKRENNQ EEVEKVTIEL LNSAEQINVV LEAKLVEEVN CVLADIGSAK TTQAVDVRRQ 240
GDELITCLEN YTHTIDQLRQ ILNSS*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 5e-37 | sequence-specific DNA binding transcription factors |
