 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_004412 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
LBD |
| Protein Properties |
Length: 240aa MW: 26728 Da PI: 9.1869 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_004412 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 113.8 | 1.2e-35 | 13 | 113 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
aCaaCk++rrkCa++Cvlap fp +++++f nvhklFG++n+++++k+++ ++r da++s+v eA ra dP Ga++++++lq++++++kael+l++
DCAR_004412 13 ACAACKHQRRKCAPECVLAPFFPPHRQAEFLNVHKLFGVRNIMNTVKKVEMSRRGDAVRSMVHEAYFRAVDPAGGAYRILSHLQHRYNHMKAELDLVR 110
7************************************************************************************************9 PP
DUF260 99 eel 101
++l
DCAR_004412 111 QQL 113
986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MTGPAGGSSV SQACAACKHQ RRKCAPECVL APFFPPHRQA EFLNVHKLFG VRNIMNTVKK 60
VEMSRRGDAV RSMVHEAYFR AVDPAGGAYR ILSHLQHRYN HMKAELDLVR QQLAIFRSVQ 120
IDGIGSEHMQ HPPLNYSNFG RKESAEAINQ TDDITSPRIN ILRGDIIKKE GSSSNRDKKT 180
MRLEKKGSAS NLDNGTFESA PYDGNGNTKI DNIDENHSSS RSHENETNSL EDVKLNVRD*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 1e-23 | 2 | 124 | 4 | 122 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 1e-23 | 2 | 124 | 4 | 122 | LOB family transfactor Ramosa2.1 |
