PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_004159
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family MYB_related
Protein Properties Length: 187aa    MW: 21581.1 Da    PI: 4.3764
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_004159genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.2e-14856248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                      +WT+eEd +lv +++++G  +W+  +++     gRt++++k+rw+++l
      DCAR_004159  8 CPWTPEEDMQLVTYIRRYGIWNWSQMPKHAArlPGRTDNEIKNRWHSHL 56
                     69*****************99********99999************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.833260IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-20562IPR009057Homeodomain-like
SuperFamilySSF466891.2E-15561IPR009057Homeodomain-like
SMARTSM007175.4E-12658IPR001005SANT/Myb domain
PfamPF002492.0E-11756IPR001005SANT/Myb domain
CDDcd001671.78E-12956No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MAAAFKKCPW TPEEDMQLVT YIRRYGIWNW SQMPKHAARL PGRTDNEIKN RWHSHLKKRI  60
ANNVVEVTEP KIEQIDSTTD TLMTCEYPND FVAPELPKLE EIYEDDPIPS YASNNIGASS  120
ISNNNIAPPA YVSSADPHIS FWREPYSLED VYGIDQCATY VDPEFGMPRA EDWFGEPFYP  180
YYEVLY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017254168.11e-138PREDICTED: myb-related protein Myb4-like
TrEMBLA0A162B9171e-137A0A162B917_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.14e-16myb domain protein 14