PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_004035

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

VOZ

Protein Properties

Length: 476aa MW: 53030.7 Da PI: 5.5601

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_004035	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	411.9	1.2e-126	207	421	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdl 98 pppsaflgpkcalwdctrp qg w qdycssfh +la eg pg+tpvlrp+gi+lkd+llf+al+ak++gk+vg+p+cegaat+k+pwna+elfdl DCAR_004035 207 PPPSAFLGPKCALWDCTRPEQG--WNQDYCSSFHGALAPIEGRPGMTPVLRPGGIGLKDNLLFSALKAKTEGKDVGVPNCEGAATTKAPWNAPELFDL 302 89*****************9..789******************************************************************* PP VOZ 99 sllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksa 196 s+legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp++++ewhlyeyei+++da+alyrlelklvd+kks+ DCAR_004035 303 SVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYEGRGWHESRKQVMNEFGGLKRSYYMDPQPMKNLEWHLYEYEISKCDAFALYRLELKLVDGKKSP 400 ********************************************************************************************** PP VOZ 197 kgkvskdsladlqkklgrlta 217 kgkv kds+a+lqk++ +l+a DCAR_004035 401 KGKVGKDSVAHLQKQMRKLSA 421 ****************987 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence Send to blast
MGKGMKNGVG GQQQNEVMKE RAKNRVDDLQ GIFCDLQSAR KESRTNDVAL LEEQVNQMLR 60 EWQSELNQPS PASSFQGGVS LGSFSTEIGR LLQLCEEEDD ATSGLPAPKP EPDMQKVYSN 120 VVLQQDCRAT QVPQQHGYGL VDQCKDSPSG ATKMRVNNMD VPIQFDYNLF DLHKGLEQTF 180 YTGFDNVGFH GQDALPQIAS FLPSICPPPS AFLGPKCALW DCTRPEQGWN QDYCSSFHGA 240 LAPIEGRPGM TPVLRPGGIG LKDNLLFSAL KAKTEGKDVG VPNCEGAATT KAPWNAPELF 300 DLSVLEGETI REWLFFDKPR RAFESGNRKQ RSLPDYEGRG WHESRKQVMN EFGGLKRSYY 360 MDPQPMKNLE WHLYEYEISK CDAFALYRLE LKLVDGKKSP KGKVGKDSVA HLQKQMRKLS 420 AVPPSKPSID GKFKPNLKDG SSYVYSASNQ SDVFDYGAGE PYDYLIEDLS GYYPT*

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence Send to blast

MGKGMKNGVG GQQQNEVMKE RAKNRVDDLQ GIFCDLQSAR KESRTNDVAL LEEQVNQMLR  60
EWQSELNQPS PASSFQGGVS LGSFSTEIGR LLQLCEEEDD ATSGLPAPKP EPDMQKVYSN  120
VVLQQDCRAT QVPQQHGYGL VDQCKDSPSG ATKMRVNNMD VPIQFDYNLF DLHKGLEQTF  180
YTGFDNVGFH GQDALPQIAS FLPSICPPPS AFLGPKCALW DCTRPEQGWN QDYCSSFHGA  240
LAPIEGRPGM TPVLRPGGIG LKDNLLFSAL KAKTEGKDVG VPNCEGAATT KAPWNAPELF  300
DLSVLEGETI REWLFFDKPR RAFESGNRKQ RSLPDYEGRG WHESRKQVMN EFGGLKRSYY  360
MDPQPMKNLE WHLYEYEISK CDAFALYRLE LKLVDGKKSP KGKVGKDSVA HLQKQMRKLS  420
AVPPSKPSID GKFKPNLKDG SSYVYSASNQ SDVFDYGAGE PYDYLIEDLS GYYPT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017230239.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_017230240.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_017230241.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A166IQH6	0.0	A0A166IQH6_DAUCS; Uncharacterized protein
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	DCAR_004035

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]