 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
DCAR_002594 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
|
| Family |
TCP |
| Protein Properties |
Length: 248aa MW: 26652.8 Da PI: 9.8693 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_002594 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 126.6 | 2.6e-39 | 27 | 126 | 2 | 99 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...kaaksaa. 95
a+kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s +sn+s + + +k+a+
DCAR_002594 27 AVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-TVSVSLRNSNNSLSaplE-QKQAPq 122
789******************************************************************888.444444444333332221.222211 PP
TCP 96 kskk 99
+++
DCAR_002594 123 LNQH 126
2222 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MSSPPPPPLP DSQKQLATAT PTNGTVAVKK PPAKDRHSKV DGRGRRIRMP IICAARVFQL 60
TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPANFSTV SVSLRNSNNS LSAPLEQKQA 120
PQLNQHLFTP TPFILGKRAR EEDSIRAGEE KSDEVSEHSV GPAGGFWALP GRPDYGQVWS 180
FAAGSDMVVP TPVNMSQQNR YMQVQGEASA ARVGNYLPIT QGHLNLLASL SGSHQQSGGG 240
RREEDHH*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ148753 | 0.0 | FJ148753.1 Daucus carota subsp. sativus clone BAC C155J02 genomic sequence. |
