PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_002099 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 243aa MW: 26933.4 Da PI: 9.9409 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.1 | 1.6e-12 | 25 | 64 | 7 | 46 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 rr+++NReAAr+sR+RKka++++Le +L++ ++L+ DCAR_002099 25 LRRLAQNREAARKSRLRKKAYVQQLESSRMQLTQLEQDLQ 64 59*************************9999999888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.9E-9 | 18 | 67 | No hit | No description |
SMART | SM00338 | 3.4E-8 | 19 | 82 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.38E-7 | 23 | 68 | No hit | No description |
PROSITE profile | PS50217 | 8.749 | 26 | 65 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 26 | 41 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-9 | 26 | 65 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MMASASPRTD TSADGDIDDK TPATLRRLAQ NREAARKSRL RKKAYVQQLE SSRMQLTQLE 60 QDLQRARQQG KYISSTGDQS QSLSGNGALA FDAEYARWLE DHTRRANELR GALLMVKLEP 120 LTEHQMIAIT NLQQSAQQAE DALSQGMEAL QQSLADTLAG SLAQSNSAGN VASYMGQMAM 180 AMGKLGTLEN FICQADNLRK QTFQQLHRIL TTRQSARAVI AINDYFSRLR ALSSLWLARP 240 RE* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011467320.1 | 1e-116 | PREDICTED: transcription factor TGA2-like isoform X5 | ||||
Refseq | XP_011467321.1 | 1e-116 | PREDICTED: transcription factor TGA2-like isoform X6 | ||||
Swissprot | Q0JNL3 | 1e-103 | TGA23_ORYSJ; Transcription factor TGA2.3 | ||||
TrEMBL | A0A162B373 | 1e-174 | A0A162B373_DAUCS; Uncharacterized protein | ||||
STRING | Sb03g037560.1 | 1e-107 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16459 | 2 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-47 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_002099 |
Publications ? help Back to Top | |||
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