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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cucsa.387990.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
GRAS |
| Protein Properties |
Length: 422aa MW: 46839.9 Da PI: 7.7477 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.387990.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 314.5 | 2.3e-96 | 55 | 412 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
l++lL+ec a+s ++l +a+++L +l ++asp+g ++ +R+++yf+ A+a+r+ +s ++++ l ++ ++++lf++vsP++kf+
Cucsa.387990.1 55 LISLLFECGVAISVDNLVEAHRMLLELTQMASPYGqSSAERVVTYFAAAMASRVINSILGICSPLLNY-------KSINNSFQLFYNVSPFIKFA 142
5799*******************************889******************777777655333.......33456899************ PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
hl+ Nq+Ile++++++ vHiiD+di+qGlQWp+LlqaL+ R + + ++RiT+vg e l tg++L+++A++lg++fe+n+ +a ++
Cucsa.387990.1 143 HLASNQTILESLSQCDIVHIIDLDIMQGLQWPPLLQALSMRMdnGRSRHVRITAVGT----TMELLLDTGKQLSDVARHLGLSFEYNP-IAGKVG 232
*****************************************9756678*********....99*************************.799*** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
++++++L+++++E+++Vn+v h l+d +++ + ++ l++++ Pkv+ +veq++ + ++ Fl+rf+++l+yysa+fdsl a l +++++r
Cucsa.387990.1 233 KIDVSMLKLRRNETVVVNWVR--HCLYDATGADWK----TIGLIQQVGPKVFAFVEQDMCY-GGAFLDRFVSSLHYYSAIFDSLGACLRSDDSNR 320
********************9..888888888888....********************99.678****************************** PP
GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+ vE+ +l rei n++a g++r +e++++Wr+ l+++ + +vp+s + ++qa l+l++++ ++g+++ + g+l l Wkd +L+++S+W+
Cucsa.387990.1 321 NQVEHSILYREINNILAIGGSSR-SGEEKFREWRSELRKC-LIEVPMSANSMAQAWLMLNMHSnNQGFSLVQGeGGTLKLRWKDTSLYTASSWT 412
*********************95.56788*********99.778*******************9****98866155566**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MSSLLLQPPP LPSSITNPST CNATTMRTRS TMLVTYKNLA PMTRSKDVDD HGLTLISLLF 60
ECGVAISVDN LVEAHRMLLE LTQMASPYGQ SSAERVVTYF AAAMASRVIN SILGICSPLL 120
NYKSINNSFQ LFYNVSPFIK FAHLASNQTI LESLSQCDIV HIIDLDIMQG LQWPPLLQAL 180
SMRMDNGRSR HVRITAVGTT MELLLDTGKQ LSDVARHLGL SFEYNPIAGK VGKIDVSMLK 240
LRRNETVVVN WVRHCLYDAT GADWKTIGLI QQVGPKVFAF VEQDMCYGGA FLDRFVSSLH 300
YYSAIFDSLG ACLRSDDSNR NQVEHSILYR EINNILAIGG SSRSGEEKFR EWRSELRKCL 360
IEVPMSANSM AQAWLMLNMH SNNQGFSLVQ GEGGTLKLRW KDTSLYTASS WTCSNGTVAL 420
N*
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