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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Cucsa.378480.1 |
| Common Name | Csa_3G750930, LOC101209675 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
Trihelix |
| Protein Properties |
Length: 514aa MW: 58805.5 Da PI: 7.2322 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.378480.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 92.4 | 4.6e-29 | 98 | 183 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+ ++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea
Cucsa.378480.1 98 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMaEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 183
8*************************************889*****************************97..66678*******85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046621 | Biological Process | negative regulation of organ growth |
| GO:0048442 | Biological Process | sepal development |
| GO:0048498 | Biological Process | establishment of petal orientation |
| GO:0090428 | Biological Process | perianth development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MDDQYPLSDL RHLLSTPPSR SHFPSSSSIP HHDLSSAAFR HHHTPYDLIM MMPRDTPLPD 60
FRSDSTTTPS ASILSPHPVH NAFDPETASI AADCATARWP RQETLTLLEI RSRLDSKFKE 120
ANQKGPLWDE VSRIMAEEHN YQRSGKKCRE KFENLYKYYK KTKEGKAGRQ DGKNYRFFRQ 180
LEALYGETSN SPSLPDSHFV GDTNLRFQQN GTNNPTASAP MSHEAHQKHY CDSLSLSNTS 240
EFETSASSDG NDDLGSVGVM DNDSMEKRRK KRGGKCWKAK IKQFIDSQMR KLIDKQEAWL 300
EKLMKTLEQK EKERMIRDEE WRRQEVSRMD RERSFWAKER AWIESRDAAL MDALQRLTGR 360
ELRDNNQYNS SPDHGLIVAE HHRNNNENQN EDGSEILNNN TARELLADNN DNYQRKIIDN 420
HGNKKRKENS TSTTTTYNLY FQQHTDSSLY SRGGGGQYDG ATHIKEQSPN SSNAGGSGGG 480
HVVQDNCFRF LMGEGDQSQA GLWENFGLKL NNGX
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
