![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cucsa.370520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 146aa MW: 16755.1 Da PI: 8.5997 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.8 | 1.8e-18 | 2 | 129 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 G+ F Ptd+el+++yL +k+ g ++ +++ +diy+ eP ++ ++ + ++++ F++ +kk+++ rk + ++W+ k ++v+s+++ Cucsa.370520.1 2 GYTFCPTDQELLCYYLYHKIVGGFVPP-IMLPVIDIYTKEPPQIWqQCGGVDGQDVHLFTCLKKKKSRVVRKVG-PNGAIWSGESKATKVFSHNN 94 99*********************9888.789*************734555578899****99998764433333.24677*************** PP NAM 98 elvglkktLvfy....kgrapkgektdWvmheyrl 128 +lvg k + f k++ + ++ +W+m ey+l Cucsa.370520.1 95 TLVGAFKRFHFEnpkmKKDGDHNNNYSWIMYEYTL 129 ***********9776555666677999******98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.911 | 1 | 146 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.62E-21 | 2 | 134 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.3E-13 | 2 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 146 aa Download sequence Send to blast |
MGYTFCPTDQ ELLCYYLYHK IVGGFVPPIM LPVIDIYTKE PPQIWQQCGG VDGQDVHLFT 60 CLKKKKSRVV RKVGPNGAIW SGESKATKVF SHNNTLVGAF KRFHFENPKM KKDGDHNNNY 120 SWIMYEYTLH PNLVPEGVVH DSFVLX |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011660358.1 | 1e-56 | PREDICTED: uncharacterized protein LOC105436381 | ||||
TrEMBL | A0A0A0L807 | 4e-90 | A0A0A0L807_CUCSA; Uncharacterized protein | ||||
STRING | XP_004170453.1 | 7e-90 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF557 | 24 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G46590.1 | 2e-10 | NAC domain containing protein 96 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Cucsa.370520.1 |