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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cucsa.363640.1 |
| Common Name | Csa_6G057150, LOC101215277 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
bZIP |
| Protein Properties |
Length: 364aa MW: 39828.5 Da PI: 8.8643 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.363640.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 25.7 | 2.5e-08 | 208 | 265 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
kr++r NR +A rs +RK ++ eLe+kv+ L++e ++L ++ l+ l++e
Cucsa.363640.1 208 KRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTE 265
9****************************************99988887766666655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007231 | Biological Process | osmosensory signaling pathway |
| GO:0008272 | Biological Process | sulfate transport |
| GO:0009294 | Biological Process | DNA mediated transformation |
| GO:0009652 | Biological Process | thigmotropism |
| GO:0009970 | Biological Process | cellular response to sulfate starvation |
| GO:0045596 | Biological Process | negative regulation of cell differentiation |
| GO:0051170 | Biological Process | nuclear import |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005829 | Cellular Component | cytosol |
| GO:0003682 | Molecular Function | chromatin binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0043621 | Molecular Function | protein self-association |
| GO:0051019 | Molecular Function | mitogen-activated protein kinase binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MSEPSTYSNH FPSPLTSLSM MDLNFTARKP PHTSARMDIE HMPEAPHRSY HHRRSHSDTS 60
FRFANFDDLL LFDSPDIDLS SALPSPSPSP SPTPSGARMA VDSFNSKSPE DASTTKPRAA 120
NGNSASFFNS HYRSLSMDSD FFEGLGMAGD GSDGEILGGR VTAGEKKIAR HRHSNSMDGS 180
LTSSFEVDSS KKAMAPDKLA ELALMDPKRA KRILANRQSA ARSKERKIRY TNELEKKVQM 240
LQSEATSLSA QVTVLQRDTT GLTTENRELK LRLQAMEQQA HLRDALNETL REEVQRLKIA 300
AAQLPVANGN SFNMGGGLPP QFPPLQTSFL QFGNSQNHQQ PQLLHMSQPD ARGGSPPSQL 360
PGA*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds specifically to the VIP1 response elements (VREs) DNA sequence 5'-ACNGCT-3' found in some stress genes (e.g. TRX8 and MYB44), when phosphorylated/activated by MPK3. Required for Agrobacterium VirE2 nuclear import and tumorigenicity. Promotes transient expression of T-DNA in early stages by interacting with VirE2 in complex with the T-DNA and facilitating its translocation to the nucleus, and mediates stable genetic transformation by Agrobacterium by binding H2A histone. Prevents cell differentiation and shoot formation. Limits sulfate utilization efficiency (SUE) and sulfate uptake, especially in low-sulfur conditions. {ECO:0000269|PubMed:11432846, ECO:0000269|PubMed:12124400, ECO:0000269|PubMed:15108305, ECO:0000269|PubMed:15824315, ECO:0000269|PubMed:17947581, ECO:0000269|PubMed:19820165, ECO:0000269|PubMed:20547563}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Transcriptionally activated during the acquisition of pluripotentiality (in protoplasts) by pericentromeric chromatin decondensation and DNA demethylation. Targeted to degradation by the proteasome by VBF and Agrobacterium virF in SCF(VBF) and SCF(virF) E3 ubiquitin ligase complexes after mediating T-DNA translocation to the nucleus. {ECO:0000269|PubMed:15108305}. |
| Publications
? help Back to Top |
- Ren Y, et al.
An integrated genetic and cytogenetic map of the cucumber genome.
PLoS ONE, 2009. 4(6): p. e5795
[PMID:19495411] - Guo S, et al.
Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types.
BMC Genomics, 2010. 11: p. 384
[PMID:20565788] - Li Z, et al.
RNA-Seq improves annotation of protein-coding genes in the cucumber genome.
BMC Genomics, 2011. 12: p. 540
[PMID:22047402] - Wang Y, et al.
The putative Agrobacterium transcriptional activator-like virulence protein VirD5 may target T-complex to prevent the degradation of coat proteins in the plant cell nucleus.
New Phytol., 2014. 203(4): p. 1266-81
[PMID:24865527] - Xu DB, et al.
A G-protein β subunit, AGB1, negatively regulates the ABA response and drought tolerance by down-regulating AtMPK6-related pathway in Arabidopsis.
PLoS ONE, 2015. 10(1): p. e0116385
[PMID:25635681] - Chen J, et al.
ZmbZIP91 regulates expression of starch synthesis-related genes by binding to ACTCAT elements in their promoters.
J. Exp. Bot., 2016. 67(5): p. 1327-38
[PMID:26689855] - Tsugama D,Liu S,Takano T
VIP1 is very important/interesting protein 1 regulating touch responses of Arabidopsis.
Plant Signal Behav, 2016. 11(6): p. e1187358
[PMID:27171129] - Tsugama D,Liu S,Takano T
The bZIP Protein VIP1 Is Involved in Touch Responses in Arabidopsis Roots.
Plant Physiol., 2016. 171(2): p. 1355-65
[PMID:27208231] - Takeo K,Ito T
Subcellular localization of VIP1 is regulated by phosphorylation and 14-3-3 proteins.
FEBS Lett., 2017. 591(13): p. 1972-1981
[PMID:28542772] - Wang L,Lacroix B,Guo J,Citovsky V
The Agrobacterium VirE2 effector interacts with multiple members of the Arabidopsis VIP1 protein family.
Mol. Plant Pathol., 2018. 19(5): p. 1172-1183
[PMID:28802023]
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