 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cucsa.310460.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
| Family |
HB-other |
| Protein Properties |
Length: 345aa MW: 39383 Da PI: 4.3967 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.310460.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 29.8 | 1e-09 | 278 | 325 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
+++k q+e+Le+++++++ p+ +++ + + ++L+ +++ WF +R
Cucsa.310460.1 278 RLKKVQIETLERVYRRTKRPTNAMISSIVQVTNLPRKRIVKWFEDKRV 325
57899***************************************9996 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002229 | Biological Process | defense response to oomycetes |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009682 | Biological Process | induced systemic resistance |
| GO:0009787 | Biological Process | regulation of abscisic acid-activated signaling pathway |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:2000022 | Biological Process | regulation of jasmonic acid mediated signaling pathway |
| GO:2000071 | Biological Process | regulation of defense response by callose deposition |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MFLSAPATAP EALPGSPSIS DRGRFFFRRR PFPSNFTLLH RPPVCRTLSL TFARRRNQNS 60
SVSSSSSSSK KKKRNLIPKE ARDEEEDVEE DALELLFSQL EEDLKNDASS LDEGEDDEFS 120
EEDLARLERE LGLALGIDVD EEEEEAEEEE EEEEEEEDDD DGDDEDDEEE EMPVKLKNWQ 180
LRRLALALKK GRRKTSIKSL AAELCLDRTV VLELLREPPP NLLMLSASLP DTPKPSIIET 240
KTLQTTDEEP LVVDTAKEEE VTKVPVHVMQ QSWAAQKRLK KVQIETLERV YRRTKRPTNA 300
MISSIVQVTN LPRKRIVKWF EDKRVEDGVP DPRLPFDRSS PQSA*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 53 | 73 | RRRNQNSSVSSSSSSSKKKKR |
