 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.259380.1 |
Common Name | Csa_3G119420, LOC105434810 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
|
Family |
Dof |
Protein Properties |
Length: 171aa MW: 18056.7 Da PI: 8.9924 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.259380.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125.1 | 2.2e-39 | 27 | 86 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
++++l+cprC+s+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rkn+k
Cucsa.259380.1 27 PQEQLNCPRCKSSNTKFCYYNNYSLTQPRYFCKSCRRYWTEGGSLRNIPVGGGSRKNRKP 86
6899*****************************************************985 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MEAMMESGAN GGGGGGGGGG LKGKGRPQEQ LNCPRCKSSN TKFCYYNNYS LTQPRYFCKS 60 CRRYWTEGGS LRNIPVGGGS RKNRKPHGSV SGSGSVHHPQ PQPQVYQAQD LNLGFATTAE 120 ATTAMDNGGH GGFGCYIPNL MPYSGRETAA VEENSGNNGY WNGMFGGGPP X
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception. |