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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.244250.1 |
Common Name | Csa_3G207940, LOC101217033 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
B3 |
Protein Properties |
Length: 466aa MW: 53127.6 Da PI: 6.8021 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.244250.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 53.9 | 3.3e-17 | 81 | 170 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
+kv++ps+v+ +l lpk f++ h ++k +++ ++lede+g+ +e k+ +k++ l++GW++F a++L +gD++vF+l+ ++f +v +
Cucsa.244250.1 81 IKVMLPSHVTGGFWLGLPKGFCDIH-LPK-QDTAMVLEDENGKLYETKYLSDKTG----LSAGWRGFSIAHKLLQGDVIVFHLVMPNKF--MVYI 167
699*******************655.554.6789***************656665....***********************9865666..9999 PP
E-S CS
B3 97 frk 99
+r+
Cucsa.244250.1 168 VRS 170
886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MNQWRPGKKE KLFRRKTWVS STQPTTSYDQ DAVHSFSQPR RVKPKRTTVD SLYHDLEAQS 60 VVMARAKEVQ AKLSPRNPSL IKVMLPSHVT GGFWLGLPKG FCDIHLPKQD TAMVLEDENG 120 KLYETKYLSD KTGLSAGWRG FSIAHKLLQG DVIVFHLVMP NKFMVYIVRS NSAAKVDGAL 180 GLKYEASYKQ TPIYSKENIP HIKEEQITVE DENAEETNVV PVKEETEEDH NPVSHPMDIH 240 EEREQTNSHK LLDTEMMPVL EESENERRSS DSNSMNGIHL SDSRLSFDKV NSLDDFIISV 300 NGLIIDSGFS NHIRAKYYEL CCSQKSFLHD HILEGLNYKL VSGIISETIN IADAIKASKV 360 TISQEHLVTW DKTLTAFEGL GMNVGFLRVR INQLLTLSQK PEKKREAEMM RDSKQEELHI 420 LLTKIMEGRT TLRQLEAKIC SLETDIKHMD KLFKEVASAP WYLER*
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