PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.184670.1
Organism
Cucumis sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 273aa    MW: 29795.4 Da    PI: 4.9002
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.184670.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.22.1e-14187232449
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                      +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+e  +L  e 
  Cucsa.184670.1 187 QQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQEHARLLREE 232
                     689************************************9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-7184237IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12186236IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.404186231IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-10188233No hitNo description
CDDcd147073.25E-20188230No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-14189232No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MASSNVEIAS TSKTNPDLPP QSSLSSISTI IADPSRSLVS ITMDDLLKNI YADAQTHNQN  60
PIIASSSSSI PSHELSSRTV DEVWKEIVSG GDQRRDPATD HEITLEDFLS KSGAVCDDDL  120
RVPVISEPVG GYAVDSTLNN NQLQIPSQQL EGPMVGGYAS GIDGRIVGVG RGKRRAVVEE  180
PVDKATQQKQ RRMIKNRESA ARSRERKQAY TLELESLVTQ LEQEHARLLR EEVPLNEICV  240
IRSFSGYFVV VFTFNQLSIT TFVTPFLGAL PP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818420.0LN681842.1 Cucumis melo genomic scaffold, anchoredscaffold00022.
GenBankLN7132590.0LN713259.1 Cucumis melo genomic chromosome, chr_5.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004140103.11e-168PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 isoform X1
TrEMBLA0A0A0KEF11e-167A0A0A0KEF1_CUCSA; Uncharacterized protein
STRINGXP_004158618.11e-167(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-27bZIP family protein