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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.162810.1 |
Common Name | WRKY12 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 313aa MW: 34382.8 Da PI: 9.3615 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.162810.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89.8 | 2.2e-28 | 145 | 205 | 1 | 60 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
++Dgy+WrKYGqK+ k+++ pr+YY+C++a +Cpvk+kv+rs e+p +++ tYeg+Hnh+k
Cucsa.162810.1 145 VKDGYQWRKYGQKVTKDNPSPRAYYKCSFApTCPVKRKVQRSVEEPCYLVATYEGQHNHPK 205
58***************************99****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MEPTSTTINT SLDLNFNPPA DQPHPPTPNS PLKQQAPTGI LAEKLNRISS ENKKLNQMLG 60 VVVENYSVLK NQVIDLIMKT RKRKAAPGCD NCCNFNRSAS SDQYCGCCSD DNDSCYNKRP 120 RENNSKPKVM RVLVPTPVSD STLIVKDGYQ WRKYGQKVTK DNPSPRAYYK CSFAPTCPVK 180 RKVQRSVEEP CYLVATYEGQ HNHPKPNSGI EYQLIGPINL GSNTKLDSSN VTSSPSSSIK 240 SPSSSSLMPS MSFDHLTKSQ PQIRSPSSSN SSSSTQKLLV QQMATLLTRD PNFTRALATA 300 ITGNMVDSEI WG*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU984014 | 0.0 | GU984014.1 Cucumis sativus WRKY protein (WRKY12) mRNA, complete cds. |