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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.123440.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
MYB |
Protein Properties |
Length: 186aa MW: 20747.1 Da PI: 10.4348 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.123440.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 59.8 | 6.1e-19 | 13 | 58 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw +
Cucsa.123440.1 13 KGPWSAEEDRILTRLVERYGPRNWSLISRYVK-GRSGKSCRLRWCNQ 58
79*****************************9.***********985 PP
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2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 67 | 109 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
++++ Ed+ +v a+ ++G++ W+tIar ++ gRt++ +k++w++
Cucsa.123440.1 67 PFSPAEDDAIVAAHSRYGNR-WATIARLLP-GRTDNAVKNHWNST 109
79******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
PPPSSSPIPD KIKGPWSAEE DRILTRLVER YGPRNWSLIS RYVKGRSGKS CRLRWCNQLC 60 PGVEHRPFSP AEDDAIVAAH SRYGNRWATI ARLLPGRTDN AVKNHWNSTL KRRVRDDRRN 120 SSSNHTSDVV GGGGNVGGGG GEVVRESDRR SENLPAGFWE VMKDVVAREV REYMTTTFSE 180 NRGFG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in auxin response. Functions in auxin signal transduction and modulates lateral root growth. Interacts with ARF response factors to promote auxin-responsive gene expression (PubMed:17675404). In response to auxin, binds sequence-specific motifs in the promoter of the auxin-responsive gene IAA19, and activates IAA19 transcription. The IAA19 transcription activation by MYB77 is enhanced by direct interaction between MYB77 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:17675404, ECO:0000269|PubMed:24894996}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin (PubMed:17675404). Down-regulated by potassium deprivation (PubMed:15173595). {ECO:0000269|PubMed:15173595, ECO:0000269|PubMed:17675404}. |