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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cucsa.118200.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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| Family |
WRKY |
| Protein Properties |
Length: 148aa MW: 16379.3 Da PI: 9.0615 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cucsa.118200.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 108.4 | 3.4e-34 | 79 | 136 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYY+Cts++C+vkk+vers+edp++v++tYeg+Hnh
Cucsa.118200.1 79 EDGYRWRKYGQKAVKNSPFPRSYYKCTSQNCSVKKRVERSSEDPSFVITTYEGKHNHY 136
8********************************************************5 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 148 aa
Download sequence Send
to blast |
MSCSSSEVIC SVDDALKKSS SLGRDLSSVV TGEHPSTPNC SSTTCSSDEV VAGGGKKKEK 60
REKGPRFAFL TKTEIDNLED GYRWRKYGQK AVKNSPFPRS YYKCTSQNCS VKKRVERSSE 120
DPSFVITTYE GKHNHYCPIT LRGHNPTG
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Kim SH, et al.
Characterization of a Novel DWD protein that participates in heat stress response in Arabidopsis.
Mol. Cells, 2014. 37(11): p. 833-40
[PMID:25358503] - Guo D, et al.
The WRKY Transcription Factor WRKY71/EXB1 Controls Shoot Branching by Transcriptionally Regulating RAX Genes in Arabidopsis.
Plant Cell, 2015. 27(11): p. 3112-27
[PMID:26578700] - Yu Y, et al.
WRKY71 accelerates flowering via the direct activation of FLOWERING LOCUS T and LEAFY in Arabidopsis thaliana.
Plant J., 2016. 85(1): p. 96-106
[PMID:26643131] - Guo D,Qin G
EXB1/WRKY71 transcription factor regulates both shoot branching and responses to abiotic stresses.
Plant Signal Behav, 2016. 11(3): p. e1150404
[PMID:26914912] - Yu Y, et al.
WRKY71 Acts Antagonistically Against Salt-Delayed Flowering in Arabidopsis thaliana.
Plant Cell Physiol., 2018. 59(2): p. 414-422
[PMID:29272465] - Zhao L, et al.
KLU suppresses megasporocyte cell fate through SWR1-mediated activation of WRKY28 expression in Arabidopsis.
Proc. Natl. Acad. Sci. U.S.A., 2018. 115(3): p. E526-E535
[PMID:29288215]
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