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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.114700.1 |
Common Name | Csa_4G055350, LOC101206472 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
Trihelix |
Protein Properties |
Length: 275aa MW: 32712.8 Da PI: 8.0097 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.114700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 61.5 | 2e-19 | 9 | 97 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+++e+++ i++r ++e++l + + +kk+lWe s +mre+gf r++ qCk+kw+nl ryk +++ k+ +cp+f++++
Cucsa.114700.1 9 QWSEEETREFIRIRADLEKDLAAVSigeapaaKKKTLWEMASVRMREKGFWRTADQCKCKWKNLLSRYKGKETSHKEY----GWQCPFFEEIH 97
7*********************8544445555**************************************99999984....558*****998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MAATPHQHQW SEEETREFIR IRADLEKDLA AVSIGEAPAA KKKTLWEMAS VRMREKGFWR 60 TADQCKCKWK NLLSRYKGKE TSHKEYGWQC PFFEEIHAVF TERGKAMHRL LLEPEACSIS 120 TKKRGRERSL EEHSDLKELN EDENEEEVTF TQSNSQKRKA ARKLPAKSLG ATDSKSSSSS 180 TSNEIQEMLK GFFQWQQRME MEWREIVERH YNNRRMFEQE WRESMEKLER ERLMAEQAWR 240 EREEQRKERQ DIRAEGMNAL LTTLLNKLNH ENNL*
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