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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cucsa.105540.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
FAR1 |
Protein Properties |
Length: 715aa MW: 83106.9 Da PI: 8.9056 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.105540.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 69.6 | 7.4e-22 | 57 | 140 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+ trtgC a+++++++++++w+v ++++eHnH l
Cucsa.105540.1 57 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKDTRTGCPAMIRMRLMDSQRWRVLEVSTEHNHLL 140
69*****************************************9988.....99*********************************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 715 aa
Download sequence Send
to blast |
MEPSLTSEQS SHVEHSDNRK EVDEDAPISE LGGHHGRKEF VVPAVGMEFE SYEDAYNYYN 60 CYAKEVGFRV RVKNSWFKRN SREKYGAVLC CSSQGFKRIK DVNRLRKDTR TGCPAMIRMR 120 LMDSQRWRVL EVSTEHNHLL GSKIYKSMKK MNGGAKRKMQ LSSDADDRTI KLYRALVIDA 180 GGSGTSDSSV KKIRIFPDHP DHLNLKKGDS QAIYNYLCRM QLTNPNFYYL TDLNDEGRLR 240 NMIWVDARSR AACAFFGDVV CFDNSYLSNK FEIPLVAFVG INHHGQSVLL GCGLLAGETT 300 ESYTWLFRAW LSCMLGRSPQ TIITDRCQHL QTAIAEVFPK SQHRFGLSFI MKKVPEKLGG 360 LRNYDAIRKA FNKAVYETLK VIEFDSAWRF MIQRFGIGDH EWLRSVFEDR GRWAPVYLKD 420 TFFAGMSSMR RGEKLNPFFD KYVHKQTPLK EFLDKYELAL QKKYKEETSA DMESRNSSPT 480 LKTRCSFELQ LSKVFTREIF TKFQFEVEEM YSCFSTTQLQ VDGPLVIFLV KERVVSDGNR 540 REIREYEVLY NRTAGEVRCI CSCFNFYGYL CRHALCVLNF NGVEEIPSRY ILSRWKKDYK 600 RLYVSDHETN LSDDTERVQW FNQLYKSALQ VVEEGAISLD HYKAALQAFE ESLSKRVKIV 660 ISNEREIKIS SEAQLFLHFG GIFKKEGKER SESPEFQSLW REFCKAHLPQ AWRS*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. May have a role in controlling flowering time. {ECO:0000269|PubMed:15591448}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |