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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.103050.1 |
Common Name | Csa_6G495020, LOC101206615 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
LBD |
Protein Properties |
Length: 234aa MW: 25665.9 Da PI: 7.7172 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.103050.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 96.9 | 2.1e-30 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+C++C+vlr++C+++C+l+p++ ++q +++ +v+k+FG++ ++++++a+pe++r+ +++sl++eA+ r+ +Pv+Gavg++++++++++q+
Cucsa.103050.1 2 SCNGCRVLRKGCSESCILRPCLqwidtSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96
6*********************9998777889*************************************************************** PP
DUF260 91 kaelall 97
+++++l+
Cucsa.103050.1 97 AVDTVLR 103
9998775 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIDTSE AQGHATVFVA KFFGRAGLMS FISAVPESQR 60 PSLFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVDT VLRGGTLRPI NDFLAAGSPN 120 LASDDTSETE VGCTDMWKIR DSYPNSRFSN SRSRLSPKRK RSEEASTKHQ LNDLDLRLTP 180 TFPAKSTLRA ATPSMNSEES ETTTCFESGL GDNHHHHYPE EGVAQRKLLN LFV*
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