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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.094440.1 |
Common Name | Csa_4G017090 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
FAR1 |
Protein Properties |
Length: 251aa MW: 28655.1 Da PI: 6.7259 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.094440.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 92.6 | 5.1e-29 | 86 | 173 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
Cucsa.094440.1 86 FYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSP 173
******************************************9988..9**************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MEFGVDGDSE VVGNSTLVED SKPLDENETG VSSIERIFDQ DQDEKIIQDS TGRNAILDSV 60 PGLPIVQADE PYVGQEFENE AAAHAFYNSY ATRVGFVIRV SKLSRSRRDG TAIGRALVCN 120 KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVNSGKWVV TKFVKEHTHP LSPGKARRDC 180 IYDQYPNEHD KIRELSQQLA IEKKRSATYK RHLEVIFEYI EEHNDSLSRK IQHIVDNVKE 240 LESVEQQNHR *
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